MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000212.1
SEQF5001_01025
Genome Viewer
NA
AA
246/82
4185-3940
hypothetical protein
SEQF5001|JADGKF010000212.1
SEQF5001_01026
Genome Viewer
NA
AA
237/79
4509-4273
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01270
Genome Viewer
NA
AA
783/261
61-843
putative cell wall biosynthesis protein LcpB
SEQF5001|JADGKF010000025.1
SEQF5001_01271
Genome Viewer
NA
AA
2577/859
1105-3681
Aminopeptidase N
SEQF5001|JADGKF010000025.1
SEQF5001_01272
Genome Viewer
NA
AA
462/154
3678-4139
PTS system glucose-specific EIIA component
SEQF5001|JADGKF010000025.1
SEQF5001_01273
Genome Viewer
NA
AA
2163/721
6319-4157
4-alpha-glucanotransferase
SEQF5001|JADGKF010000025.1
SEQF5001_01274
Genome Viewer
NA
AA
228/76
6835-6608
PTS system N-acetylglucosamine-specific EIIB component
SEQF5001|JADGKF010000025.1
SEQF5001_01275
Genome Viewer
NA
AA
1698/566
7087-8784
Phosphoenolpyruvate-protein phosphotransferase
SEQF5001|JADGKF010000025.1
SEQF5001_01276
Genome Viewer
NA
AA
966/322
8781-9746
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01277
Genome Viewer
NA
AA
393/131
10226-9834
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01278
Genome Viewer
NA
AA
225/75
10447-10223
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01279
Genome Viewer
NA
AA
1683/561
12451-10769
Energy-dependent translational throttle protein EttA
SEQF5001|JADGKF010000025.1
SEQF5001_01280
Genome Viewer
NA
AA
1122/374
13831-12710
Peptide chain release factor 2
SEQF5001|JADGKF010000025.1
SEQF5001_01281
Genome Viewer
NA
AA
912/304
14779-13868
Hydrogen peroxide-inducible genes activator
SEQF5001|JADGKF010000025.1
SEQF5001_01282
Genome Viewer
NA
AA
396/132
14810-15205
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01283
Genome Viewer
NA
AA
603/201
15942-15340
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01284
Genome Viewer
NA
AA
408/136
16346-15939
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01285
Genome Viewer
NA
AA
705/235
17178-16474
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01286
Genome Viewer
NA
AA
267/89
17500-17234
hypothetical protein
SEQF5001|JADGKF010000025.1
SEQF5001_01287
Genome Viewer
NA
AA
927/309
18583-17657
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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